Sunday, April 12, 2009

Deamination and transamination

Deamination examples

The amino acid threonine has its amino group removed by threonine dehydratase (1p209). This particular amino acid is commonly deaminated along with glutamate, histidine, serine and glycine (1p209). In the case of thronine, the reaction proceeds with loss of water, which is why the enzyme catalyzing the reaction is called a dehydratase instead of a deaminase (1p209). Vitamin B6 is important for this reaction to occur (1p209). The amino group is used by periportal hepatocytes to synthesize urea (1p209).

Transamination examples

The transfer of an amino groupf from one amino acid to an amino acid carbon skeleton or alpha-keto acid occurs to feed protein synthesis (1p209). The enzymes include tyrosine aminotransferase, branched-chain aminotransferases, alanine aminotransferase, and aspartate aminotransferase (1p209). The enzymes can often require vitamin B6 in a coenzyme form (1p209). The reactions are reversible and are often used to create non-essential amino acids from essential ones except lysine, histidiene and threonine (1p209).

Reference List

1. Gropper SS, Smith JL, Groff JL. Advanced Nutrition and Human Metabolism. Belmont, CA: Thomson Wadsworth, 2009.

Saturday, April 11, 2009

Emergency contraception and ectopic pregnancy

One of the worst risks of emergency contraception is possible failure leading to ectopic pregnancy. Yes, it can occur, according to Indian researchers from All India Institute of Medical Sciences (1). A case report in 2001 occurred as a result of the use of levonorgestrel (1). For the most part, however, levonorgestrel is considered safe and effective (1).

Reference List
1. Ghosh B, Dadhwal V, Deka D, Ramesan CK, Mittal S. Ectopic pregnancy following levonorgestrel emergency contraception: a case report. Contraception 2009;79:155-7.

Dysmenorrhea news

Endometriosis can ultimately result in causing dysmenorrhea (1). According to Chinese researchers, there has been conflicting reports leading to debate about the actual relationship, but statistical models suggest a stage and site of the endometriotic lesions (1). According to the researchers, there is still variation recognized and further research is needed (1).

Reference List
1. Liu X, Guo SW. Dysmenorrhea: risk factors in women with endometriosis. Womens Health (Lond Engl ) 2008;4:399-411.

Increased Intracranial Pressure

Although its name sounds as though it may occur from studying for a pathophysiology exam, increased Intracranial Pressure (ICP) actually is associated with impaired cerebral venous drainage and reabsorption of cerebrospinal fluid (CSF) (1).

The potential complication can come from a variety of pathologies including central nervous system edema, tumor masses, hematoma, hydrocephalus, venous obstruction and increased CSF volume (1p557-8).

Increased ICP can occur in four stages:

  • Stage 1 is a phase of potential danger from one of the complications listed previously.
  • Stage 2 is a gradual rise in ICP effectively causing cerebral perfusion to drop and a decrease in oxygenation that stimulates vasoconstriction to increase cardiac output, resulting in lowered consciousness of the patient.
  • Stage 3 is the established condition of rapid rise of ICP at a point where it is called the stage of decompensation and autoregulation is lost, resulting in increased blood volume in the brain, hypoxia and cytotoxic edema, which only makes things worse anc causing coma to deepen (1p558). A pattern of apnea for 15-60 seconds followed by deep, labored breathing that eventually becomes shallow and apneic again is called Cheyne-Stokes respiration (1p558). Carbon dioxide accumulation induces the cycled breathing (1p558). Hypoxia and vasoconstriction stretches pressure receptors in carotid arteries signaling the medulla to induce bradycardia (1p558).
  • Stage 4 results when cerebral perfusion pressure falls below 30 mm Hg, widespread necrosis begins, and compression of brain stem respiratory centers leads to respiratory arrest and death.

Reference List
1. Nowak TJ, Handford AG. Pathophysiology: Concepts and Applications for Health Professionals. New York: McGraw-Hill, 2004.

Post-32-HyperPsychoProteinuria Stages 1 and 2

When a woman reaches 32 weeks into a first pregnancy, it’s possible that a peculiar syndrome may occur—possibly due to loss of a genetic imprinting in placental tissues (1)—that appears to originate from an implantation abnormality (1). The abnormality causes ischemia in placental blood vessels and could potentially cause a placental infarct, but usually triggers vasoconstrictors to activate fluid retention that causes hypertension (1).

The ischemic placenta also disrupts endothelia causing a predisposition to disseminated intravascular coagulation (1). This blocks microcirculation causing tissue hypoxia and reduced blood flow in the kidney causes albuminuria, which leads to systemic edema (1). The symptoms may be accompanied by headache and vision disruption (2). In addition, the woman may have memory and concentration problems, according to a study published in March (3).

Also, a March-published “revised view” in Placenta also reviews placental stress as leading to the syndrome (4). The study suggests a two-stage model claiming, “it is not only an endothelial disease, but a disorder of systemic inflammation” (4).

The syndrome was previously called toxemia, but wasn’t a good name since no toxins are involved (1). The syndrome is now called preeclampsia referring to late occurrence of convulsions and coma (1). But it could use another name more in line with its symptoms for early detection… Post-32-HyperPsychoProteinuria. And it could be separated into Stage 1 and 2.

Reference List
1. Yu L, Chen M, Zhao D et al. The H19 Gene Imprinting in Normal Pregnancy and Pre-eclampsia. Placenta 2009.
2. Nowak TJ, Handford AG. Pathophysiology: Concepts and Applications for Health Professionals. New York: McGraw-Hill, 2004.
3. Baecke M, Spaanderman ME, van der Werf SP. Cognitive function after pre-eclampsia: an explorative study. J Psychosom Obstet Gynaecol 2009;30:58-64.
4. Redman CW, Sargent IL. Placental stress and pre-eclampsia: a revised view. Placenta 2009;30 Suppl A:S38-S42.

When insulin becomes denatured

Protein denaturation is the unfolding of the secondary or tertiary structures (1). For example, heat can denature proteins in eggs by disrupting hydrogen bonds and non-polar hydrophobic interactions and as a result the egg proteins coagulate during cooking (1). Alcohol, like heat, can also disrupt hydrogen bonds, and acids, bases and heavy metal salts denature proteins by disrupting salt bridges (1).

What are biochemical consequences of denaturation of insulin?

In the body, protein denaturation can affect processes biochemically. Native insulin, for example, in the presence of increased, urea may be denatured because of changes in pH or, in the presence of a thiol catalyst, may be denatured due to isomerization (2). The insulin, thus, is unable to properly cause cells to take up glucose as it should (2).

Reference List
1. Ophardt CE. 2003. “Denaturation of Proteins.” Virtual Chembook. Available at: http://www.elmhurst.edu/~chm/vchembook/568denaturation.html
2. Jiang C, Jui-Yoa Chang. 2005. Unfolding and breakdown of insulin in the presence of endogenous thiols. FEBS Letters, 579;18. Available at: http://www.febsletters.org/article/S0014-5793(05)00720-9/abstract.
3. Chemistry and Biochemistry Department of Ohio University [Web page]. “Proteins.” Available at: http://dwb4.unl.edu/Chem/CHEM869K/CHEM869KLinks/main.chem.ohiou.edu/~wathen/chem302/protein.html

What happens in untreated type 1 diabetes?

Type 1 diabetes is characterized by autoimmune destruction of beta cells in the islets of Langerhans, which results in lack of insulin secretion (1). Glucose, then cannot be taken up by cells leading to hyperglycemia and osmotic diuresis (1). The low insulin will also stimulate hepatic glycogenolysis and gluconeogenesis to produce glucose released into blood leading into accentuated hyperglycemia (1).

What’s more is that gluconeogenesis becomes chronic depleting body proteins to break down into amino acids (1). Muscle,in effect, atrophes converting to glucose and lost through the diuresis (1). Weakness, fatigue and weight loss all occur (1).

Insulin inhibits degradation of protein and increases protein synthesis (2). Opposite to this, lack of insulin creates an environment favoring glucagon leaving degradation of protein unchecked and protein synthesis diminished (2). The degradation occurs by action of proteases—lysosomal or proteosomal—or via the calcium-activated proteolytic degradation pathway (2p234). The increased protein degradation increases nitrogen output resulting in a negative nitrogen balance (2p232).

One example of proteosomal degradation relies on activation of ubiquitin, steps of which are inhibited by insulin (2p208). Insulin also antagonizes activation of a few enzymes—such as the phosphorylation of phenylalanine hydroxylase—responsible for amino acid oxidation (2). The catabolism of amino acids involve transamination or damination (2p209). The amino groups are form alpha-ketobutyrate and ammonia, which must be removed in the urea cycle (2p209).

A mixture of amino acids that is high in alanine and glutamine would be released into the blood (2p246). Alanine, in particular, is a preferred substrate for gluconeogenesis and also stimulates secretion of glucagon, which stimulates gluconeogenesis (2p246).

Deamination/transamination of glycine, serine, cysteine, tryptophan and threonine leaves skeletons oxaloacetate and pyruvate ready for glucose production (2p212). Apart from those, phenylalanine and tyrosine could also be used for glucose when degraded to fumarate (2p212). Valine and methionine are gluconeogenic and isoleucine and threonine are partially glucogenic and partially ketogenic (2p212). Leucine and lycine would not contribute to gluconeogenesis since theyare ketogenic and catabolized to acetyl CoA (2p212).

Because muscle protein provides most of amino acids, particularly in stress situations, muscle cachexia occurs (2p242). The degradation of fast-twitch muscle would be more pronounced than that of the red slow-twitch (2p242). The protein degradation would not be unlike that of starvation with each gram of nitrogen equivalent to 30g of hydrated lean tissue (2p246).

Ketoacidosis is also a logical result. Just as in fasting and starvation, lack of insulin in type 1 diabetes disabling uptake of glucose in cells would lead tissues to use fatty acid oxidation for energy (apart from amino acids) (2p247). Fatty acid oxidation provides energy through production of acetyl CoA, a TCA cycle substrate (2p160). The acetyl CoA use can end up in the "overflow" pathway of ketone body formation (2p160). The ketones would be used as a source of fuel, but in excess can disturb acid-base balance causing acidosis (2p160;2p247).

Reference List
1. Nowak TJ, Handford AG. Pathophysiology: Concepts and Applications for Health Professionals. New York: McGraw-Hill, 2004.
2. Gropper SS, Smith JL, Groff JL. Advanced Nutrition and Human Metabolism. Belmont, CA: Thomson Wadsworth, 2009.